Currently I'm afraid there's no way to do this, The Marked List is alpha sorted for speed and a binary search is used to search and find matching items. If the list was sorted any other way after you add a few dozen names to the list it would be too slow to be useful.
The standard windows behavior is to alpha sort the folder treeview regardless of the file list sort order. Currently there is no way to apply any other type of sorting. Also the treeview uses a binary search so if we did sort it differently then populating the treeview as well as searching it would be much slower.
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