xdupe is a complement to glftpd which provides the xdupe feature, as far as I know glftpd is the only ftp server which supports xdupe. It's up to the ftp server to list which files already exist. Are you enabling xdupe everytime you login?
Abort is a mystical thing, sometimes it works and sometimes it doesn't. It depends alot on the ftp server software and what is going on in that moment in time. Some servers will sometimes refuse to abort under certain situations. In those cases you will need to disconnect and reconnect.
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